STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_02980CLP1_P domain-containing protein. (539 aa)    
Predicted Functional Partners:
Gasu_18890
Uncharacterized protein.
   
 0.998
Gasu_52150
Uncharacterized protein.
   
 0.904
Gasu_55800
Uncharacterized protein.
   
 0.904
Gasu_09030
Transducin family protein / WD-40 repeat family protein.
   
 
 0.870
Gasu_54470
WD_REPEATS_REGION domain-containing protein.
   
 0.850
Gasu_13710
Nucleolar protein pescadillo.
   
 
  0.809
Gasu_57600
rRNA processing protein-related protein isoform 1.
   
 
 0.703
Gasu_53310
SUMO-specific protease/ cysteine-type peptidase.
   
 0.644
Gasu_48420
SUMO-specific protease/ cysteine-type peptidase.
   
 0.644
Gasu_25440
60S ribosomal protein L7e.
   
 
  0.605
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.