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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_041803-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. (493 aa)    
Predicted Functional Partners:
Gasu_21930
Chorismate synthase.
 
 0.989
Gasu_49560
Shikimate kinase.
  
 
 0.923
Gasu_30830
Shikimate kinase.
  
 
 0.923
Gasu_01510
Bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase.
 
     0.920
Gasu_05690
Long-chain acyl-CoA synthetase.
    
 0.901
Gasu_30570
3-dehydroquinate synthase.
 
      0.900
Gasu_05780
Long-chain acyl-CoA synthetase.
    
 0.888
Gasu_02100
Long-chain acyl-CoA synthetase.
    
 0.850
Gasu_26000
Anthranilate synthase component II.
  
 
 0.802
Gasu_33750
Indole-3-glycerol phosphate synthase.
  
 
 0.802
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.