STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_04460Peptidylprolyl isomerase. (353 aa)    
Predicted Functional Partners:
Gasu_53080
E3 SUMO-protein ligase RanBP2.
 
 
 0.923
Gasu_37050
RRM domain-containing protein.
 
    
 0.890
Gasu_30740
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.760
Gasu_10040
Uncharacterized protein.
    
 0.718
Gasu_35190
Uncharacterized protein.
    
 0.713
Gasu_53070
Nucleocytoplasmic transporter.
   
 0.700
Gasu_28270
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.700
Gasu_06550
Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 0.686
Gasu_36350
Transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
    
 0.678
Gasu_56480
Nuclear pore protein.
   
 0.672
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.