STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_04870M7G(5')pppN diphosphatase. (399 aa)    
Predicted Functional Partners:
Gasu_10490
Enhancer of mRNA-decapping protein 4.
    
 0.989
Gasu_36050
mRNA-decapping enzyme subunit 2.
    
 0.938
Gasu_57280
NTP_transf_9 domain-containing protein.
    
 0.938
Gasu_64750
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
   
 0.932
Gasu_00430
Pyridoxamine 5'-phosphate oxidase isoform 1.
   
 0.932
Gasu_34120
5'-3' exoribonuclease.
    
 0.929
Gasu_49670
5'-3' exoribonuclease 1.
    
 0.929
Gasu_57930
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.922
Gasu_44990
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.922
Gasu_35960
LSM14 domain-containing protein.
    
 
 0.909
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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