Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_01120 | Gasu_13440 | M2Y9J1 | M2X4M7 | ATP-dependent RNA helicase (Mitochondrial). | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.411 |
Gasu_01120 | Gasu_19780 | M2Y9J1 | M2Y4H1 | ATP-dependent RNA helicase (Mitochondrial). | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 0.575 |
Gasu_01120 | Gasu_33090 | M2Y9J1 | M2XGV6 | ATP-dependent RNA helicase (Mitochondrial). | Polyribonucleotide nucleotidyltransferase. | 0.400 |
Gasu_01120 | Gasu_44820 | M2Y9J1 | M2XWI5 | ATP-dependent RNA helicase (Mitochondrial). | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 0.575 |
Gasu_01120 | Gasu_45140 | M2Y9J1 | M2WVL3 | ATP-dependent RNA helicase (Mitochondrial). | RNA helicase. | 0.429 |
Gasu_01120 | Gasu_45260 | M2Y9J1 | M2XWM7 | ATP-dependent RNA helicase (Mitochondrial). | Exoribonuclease II. | 0.575 |
Gasu_01120 | Gasu_50820 | M2Y9J1 | M2XUQ3 | ATP-dependent RNA helicase (Mitochondrial). | Polyribonucleotide nucleotidyltransferase. | 0.400 |
Gasu_13440 | Gasu_01120 | M2X4M7 | M2Y9J1 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | ATP-dependent RNA helicase (Mitochondrial). | 0.411 |
Gasu_13440 | Gasu_45140 | M2X4M7 | M2WVL3 | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | RNA helicase. | 0.443 |
Gasu_19780 | Gasu_01120 | M2Y4H1 | M2Y9J1 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | ATP-dependent RNA helicase (Mitochondrial). | 0.575 |
Gasu_33090 | Gasu_01120 | M2XGV6 | M2Y9J1 | Polyribonucleotide nucleotidyltransferase. | ATP-dependent RNA helicase (Mitochondrial). | 0.400 |
Gasu_33090 | Gasu_45140 | M2XGV6 | M2WVL3 | Polyribonucleotide nucleotidyltransferase. | RNA helicase. | 0.462 |
Gasu_33090 | Gasu_50820 | M2XGV6 | M2XUQ3 | Polyribonucleotide nucleotidyltransferase. | Polyribonucleotide nucleotidyltransferase. | 0.911 |
Gasu_44820 | Gasu_01120 | M2XWI5 | M2Y9J1 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | ATP-dependent RNA helicase (Mitochondrial). | 0.575 |
Gasu_45140 | Gasu_01120 | M2WVL3 | M2Y9J1 | RNA helicase. | ATP-dependent RNA helicase (Mitochondrial). | 0.429 |
Gasu_45140 | Gasu_13440 | M2WVL3 | M2X4M7 | RNA helicase. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.443 |
Gasu_45140 | Gasu_33090 | M2WVL3 | M2XGV6 | RNA helicase. | Polyribonucleotide nucleotidyltransferase. | 0.462 |
Gasu_45140 | Gasu_50820 | M2WVL3 | M2XUQ3 | RNA helicase. | Polyribonucleotide nucleotidyltransferase. | 0.462 |
Gasu_45260 | Gasu_01120 | M2XWM7 | M2Y9J1 | Exoribonuclease II. | ATP-dependent RNA helicase (Mitochondrial). | 0.575 |
Gasu_50820 | Gasu_01120 | M2XUQ3 | M2Y9J1 | Polyribonucleotide nucleotidyltransferase. | ATP-dependent RNA helicase (Mitochondrial). | 0.400 |
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