STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01350DUF3641 domain-containing protein. (288 aa)    
Predicted Functional Partners:
Gasu_31630
Arsenite methyltransferase.
 
     0.895
Gasu_26140
Arsenite methyltransferase.
 
     0.874
chlL
Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
  
  
 0.722
Gasu_01370
Metallo-beta-lactamase family protein.
  
  
 0.698
Gasu_53630
Peptidyl-prolyl cis-trans isomerase isoform 2.
     
 0.634
Gasu_34510
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
  
 0.629
Gasu_39250
Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family.
     
 0.616
Gasu_53910
PNPLA domain-containing protein.
  
  
 0.593
Gasu_63450
Uroporphyrin-III C-methyltransferase.
  
  
 0.584
Gasu_09530
Biotin synthetase.
     
 0.559
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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