STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01080Oligouridylate-binding protein, putative. (309 aa)    
Predicted Functional Partners:
Gasu_28130
Splicing factor, arginine/serine-rich 2.
  
 0.852
Gasu_29450
RNA-binding protein.
  
 0.796
Gasu_33180
Splicing factor, arginine/serine-rich 7.
   
 0.771
Gasu_00100
Small nuclear ribonucleoprotein Sm D2.
   
 0.758
Gasu_29090
Fip1 domain-containing protein.
   
 0.752
Gasu_07880
Small nuclear ribonucleoprotein G.
   
 0.748
Gasu_28640
Small nuclear ribonucleoprotein F isoform 1.
   
 0.745
Gasu_25970
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.743
Gasu_32670
Small nuclear ribonucleoprotein Sm D3.
   
 0.731
Gasu_26890
U1 small nuclear ribonucleoprotein C.
   
 0.731
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.