STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01830Rtf2 domain-containing protein. (255 aa)    
Predicted Functional Partners:
Gasu_53130
Uncharacterized protein.
      
 0.489
Gasu_11150
RNA polymerase-associated protein RTF1-like protein.
   
  
 0.477
Gasu_52420
MSC domain-containing protein.
   
  
 0.467
Gasu_41120
Transducin family protein / WD-40 repeat family protein.
      
 0.465
Gasu_53780
UBX domain-containing protein.
      
 0.465
Gasu_27030
Es2 protein.
      
 0.441
Gasu_59010
Pre-mRNA-splicing factor 18.
      
 0.440
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.