STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000499525_02418Unannotated protein. (498 aa)    
Predicted Functional Partners:
GCA_000499525_02419
Unannotated protein.
 
 
  0.964
GCA_000499525_02420
Unannotated protein.
 
     0.884
GCA_000499525_02415
Unannotated protein.
 
     0.842
GCA_000499525_02417
Unannotated protein.
 
   
 0.837
GCA_000499525_02422
Unannotated protein.
 
     0.818
GCA_000499525_02416
Unannotated protein.
 
     0.804
GCA_000499525_00145
Unannotated protein.
  
 0.756
GCA_000499525_02411
Unannotated protein.
 
     0.747
GCA_000499525_01788
Unannotated protein.
 
 
  0.737
GCA_000499525_00914
Unannotated protein.
 
 
  0.704
Your Current Organism:
Clostridium dakarense
NCBI taxonomy Id: 1301100
Other names: CSUR P243, Clostridium sp. 01, DSM 27086, [. dakarense, [Clostridium] dakarense, strain FF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.