STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IWT126_01275Unannotated protein; Belongs to the UPF0342 family. (113 aa)    
Predicted Functional Partners:
pspE_1
Unannotated protein.
  
     0.699
IWT126_01274
Unannotated protein.
 
     0.687
IWT126_01272
Unannotated protein.
 
    0.675
GCA_001313225_01681
Unannotated protein.
 
     0.671
IWT126_02247
Unannotated protein; Belongs to the UPF0473 family.
 
     0.671
GCA_001313225_01677
Unannotated protein.
 
     0.665
GCA_001313225_01679
Unannotated protein.
 
     0.665
IWT126_01742
Unannotated protein.
  
    0.664
IWT126_00989
Unannotated protein.
  
     0.655
GCA_001313225_01394
Unannotated protein.
  
     0.631
Your Current Organism:
Lactobacillus silagei
NCBI taxonomy Id: 1302250
Other names: L. silagei JCM 19001, Lactobacillus silagei IWT126, Lactobacillus silagei JCM 19001, Lactobacillus sp. IWT126, Lactobacillus sp. JCM 19001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.