STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpk_1Unannotated protein. (819 aa)    
Predicted Functional Partners:
pykF
Unannotated protein; Belongs to the pyruvate kinase family.
     
 0.890
gapA_1
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.888
gapA_2
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.888
pta
Unannotated protein.
  
 
 0.860
pgi
Unannotated protein; Belongs to the GPI family.
    
 0.827
tpiA
Unannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.817
eno
Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.815
IWT126_00406
Unannotated protein; Belongs to the LDH/MDH superfamily.
     
 0.797
IWT126_00739
Unannotated protein; Belongs to the LDH/MDH superfamily.
     
 0.787
gpmA_1
Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.784
Your Current Organism:
Lactobacillus silagei
NCBI taxonomy Id: 1302250
Other names: L. silagei JCM 19001, Lactobacillus silagei IWT126, Lactobacillus silagei JCM 19001, Lactobacillus sp. IWT126, Lactobacillus sp. JCM 19001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.