STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK49137.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
KRK47796.1
Hypothetical protein.
  
     0.664
KRK48670.1
Hypothetical protein.
  
     0.659
KRK47331.1
Multidrug transport protein.
  
     0.564
KRK49336.1
Hypothetical protein.
  
     0.535
KRK47705.1
Hypothetical protein.
  
     0.514
KRK49514.1
Hypothetical protein.
  
     0.471
KRK49138.1
Asparagine synthase.
       0.468
KRK49245.1
Hypothetical protein.
  
     0.442
KRK47926.1
Hypothetical protein.
  
     0.433
KRK47390.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.