STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK47254.1Protein tyrosine serine phosphatase. (260 aa)    
Predicted Functional Partners:
KRK47018.1
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.830
KRK47252.1
Ethanolamine utilization protein EutS.
 
     0.803
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.794
KRK47253.1
Hypothetical protein.
       0.773
KRK47214.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.724
KRK48810.1
Hypothetical protein.
    
   0.710
KRK47255.1
Hypothetical protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.678
KRK47248.1
pduObis protein.
 
     0.633
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.608
KRK47256.1
Ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
     0.606
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.