STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK48711.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
KRK48431.1
NADPH-dependent glutamate synthase (large subunit).
   
 
 0.797
KRK46865.1
Hypothetical protein.
  
     0.723
KRK49091.1
Hypothetical protein.
  
     0.712
KRK47996.1
Hypothetical protein.
  
     0.674
KRK48759.1
Hypothetical protein.
  
     0.669
KRK47441.1
Lipoprotein.
  
     0.606
KRK48710.1
Peroxide operon transcriptional regulator; Belongs to the Fur family.
       0.568
KRK48712.1
3-carboxymuconate cyclase.
       0.528
KRK46903.1
Hypothetical protein.
  
     0.523
KRK47958.1
Hypothetical protein.
 
     0.497
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.