STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK48820.1ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
KRK48818.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 0.999
KRK48819.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.999
KRK48821.1
Nickel-transporting ATPase; Belongs to the ABC transporter superfamily.
 
 
0.996
KRK48817.1
ABC transporter, substrate-binding protein, family 5.
 
 0.973
KRK47599.1
ABC transporter periplasmic protein.
 
 0.945
KRK48653.1
Lipoprotein precursor, peptide binding protein OppA-like protein.
 
 0.943
KRK46815.1
ABC-type oligopeptide transport system, periplasmic component.
 
 0.937
KRK48630.1
ABC transporter, substrate-binding protein, family 5.
 
 0.937
KRK47276.1
Lipoprotein precursor, peptide binding protein OppA-like protein.
 
 0.935
KRK48425.1
Oligopeptide ABC superfamily ATP binding cassette transporter substrate binding protein.
 
 0.931
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.