STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK48075.1Thioredoxin reductase. (314 aa)    
Predicted Functional Partners:
KRK47186.1
Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family.
  
 0.914
KRK48792.1
Hypothetical protein.
  
 0.912
KRK48431.1
NADPH-dependent glutamate synthase (large subunit).
    
 0.909
KRK49157.1
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.883
KRK48848.1
Hypothetical protein.
  
 0.860
KRK48337.1
Peroxiredoxin.
  
 
 0.843
KRK47306.1
CoA-disulfide reductase.
    
 0.838
KRK49208.1
Thiol-disulfide isomerase and thioredoxin.
  
 0.788
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.757
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
     
 0.719
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.