STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK48188.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
KRK48185.1
Hypothetical protein.
       0.814
KRK48184.1
Hypothetical protein.
       0.773
KRK48186.1
Hypothetical protein.
       0.773
KRK48187.1
Hypothetical protein.
       0.773
KRK47271.1
Hypothetical protein.
  
 0.739
KRK49210.1
DNA segregation ATPase FtsK SpoIIIE related protein; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.650
KRK49554.1
DNA segregation ATPase FtsK SpoIIIE related protein; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.650
KRK47659.1
Hypothetical protein.
    
 
 0.630
KRK47644.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.592
KRK48210.1
Hypothetical protein.
    
  0.562
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.