STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK47853.12,5-didehydrogluconate reductase. (278 aa)    
Predicted Functional Partners:
KRK46927.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.786
KRK48782.1
Lactoylglutathione lyase.
   
 0.769
phnW
(2-aminoethyl)phosphonate--pyruvate aminotransferase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
   
 
 0.767
KRK46897.1
Threonine dehydratase.
   
 
  0.720
KRK47852.1
NAD-dependent epimerase dehydratase.
  
    0.611
KRK47851.1
Alpha beta fold family hydrolase-like protein.
       0.559
KRK47854.1
ABC transporter ATP binding protein permease.
     
 0.437
KRK47855.1
ABC transporter ATP binding protein permease.
       0.430
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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