STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK47908.1ABC transporter ATPase. (233 aa)    
Predicted Functional Partners:
KRK47909.1
Antimicrobial peptide ABC transporter permease.
 
  0.986
KRK47780.1
Efflux ABC transporter, permease protein.
 
 0.970
KRK47440.1
Xenobiotic-transporting ATPase.
 
     
0.822
KRK47410.1
ABC transporter related protein.
 
     
0.812
KRK48750.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
   
  0.752
KRK47294.1
ABC transporter related protein.
 
 
0.736
KRK47110.1
Phosphonate-transporting ATPase.
  
 
0.727
pstB-3
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
   
0.724
KRK47842.1
ABC superfamily ATP binding cassette transporter, membrane protein.
   
  0.720
KRK48819.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 
    0.669
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.