STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK47693.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
KRK47694.1
XRE family transcriptional regulator.
 
     0.897
KRK48642.1
Hypothetical protein.
  
     0.747
KRK49424.1
Hypothetical protein.
  
     0.723
KRK46989.1
Hypothetical protein.
  
     0.721
KRK47713.1
Hypothetical protein.
  
     0.713
KRK48753.1
Hypothetical protein.
  
     0.703
KRK47705.1
Hypothetical protein.
  
     0.613
KRK49390.1
Hypothetical protein.
  
     0.606
KRK47796.1
Hypothetical protein.
  
     0.583
KRK49121.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.