STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK47772.1Polar amino acid ABC transporter inner membrane subunit. (222 aa)    
Predicted Functional Partners:
KRK47773.1
ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
  0.998
KRK46819.1
L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK; Belongs to the bacterial solute-binding protein 3 family.
  0.993
KRK48752.1
L-cystine ABC superfamily ATP binding cassette transporter, binding protein YckK; Belongs to the bacterial solute-binding protein 3 family.
  0.992
KRK48751.1
Amino acid abc transporter, atp-binding protein.
 
  0.960
KRK47400.1
Phosphonate-transporting ATPase.
 
  0.919
KRK47731.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
  0.918
KRK49478.1
Phosphonate-transporting ATPase.
 
  0.916
KRK47291.1
Sulfur-containing amino acid ABC transporter ATP-binding protein TcyN.
 
  0.908
KRK48812.1
ABC-type polar amino acid transport system, ATPase component.
 
  0.906
KRK47064.1
Phosphate ABC transporter ATP-binding protein.
 
  0.903
Your Current Organism:
Lactobacillus kimchicus
NCBI taxonomy Id: 1302272
Other names: L. kimchicus JCM 15530, Lactobacillus kimchicus DCY51, Lactobacillus kimchicus JCM 15530, Lactobacillus sp. DCY51
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