STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE59974.1Hypothetical protein. (398 aa)    
Predicted Functional Partners:
SHF39524.1
Hypothetical protein.
  
     0.540
SHE59999.1
Hypothetical protein.
       0.531
SHE76799.1
WG containing repeat-containing protein.
  
     0.478
SHE84803.1
Transmembrane protein EpsG.
  
     0.457
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.455
SHE89294.1
Protein of unknown function.
  
     0.455
Your Current Organism:
Chryseobacterium takakiae
NCBI taxonomy Id: 1302685
Other names: CGMCC 1.12488, Chryseobacterium sp. AG1-2, Chryseobacterium takakiae Zhao et al. 2015, DSM 26898, strain AG1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.