STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK72317.1Protein of unknown function, DUF393. (270 aa)    
Predicted Functional Partners:
SHK72282.1
Ligand-binding SRPBCC domain-containing protein.
       0.610
SHK72253.1
Hypothetical protein.
       0.587
SHK72221.1
Hypothetical protein.
       0.410
Your Current Organism:
Chryseobacterium polytrichastri
NCBI taxonomy Id: 1302687
Other names: C. polytrichastri, CGMCC 1.12491, Chryseobacterium polytrichastri Chen et al. 2015, Chryseobacterium sp. YG4-6, DSM 26899, strain YG4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.