STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL00001.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SHK99968.1
Nitroreductase.
       0.489
SHK99937.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.434
SHL00040.1
Lanthionine synthetase C-like protein.
       0.408
SHK99894.1
Hypothetical protein.
       0.402
SHK99857.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
       0.400
Your Current Organism:
Chryseobacterium polytrichastri
NCBI taxonomy Id: 1302687
Other names: C. polytrichastri, CGMCC 1.12491, Chryseobacterium polytrichastri Chen et al. 2015, Chryseobacterium sp. YG4-6, DSM 26899, strain YG4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.