STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKS88356.1Hypothetical protein; Belongs to the FPP/GGPP synthase family. (323 aa)    
Predicted Functional Partners:
OKS85256.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.951
OKS87774.1
Hypothetical protein.
  
 0.950
OKS86896.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.919
OKS85239.1
Hypothetical protein; Belongs to the UbiA prenyltransferase family.
  
 
 0.907
OKS88355.1
Hypothetical protein.
     
 0.860
OKS88398.1
Nucleoside diphosphate kinase; Belongs to the NDK family.
 
 
 0.665
OKS88354.1
Hypothetical protein.
       0.634
dacA
Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
     
 0.600
menG
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
  
 0.593
OKS86256.1
Isopentenyl-diphosphate Delta-isomerase 2.
  
 
 0.558
Your Current Organism:
Mucilaginibacter polytrichastri
NCBI taxonomy Id: 1302689
Other names: CGMCC 1.12493, DSM 2690, DSM:2690, M. polytrichastri, Mucilaginibacter polytrichastri Chen et al. 2014, Mucilaginibacter sp. RG4-7, strain RG4-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.