STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLY90855.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
OLY93649.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.663
OLY91015.1
Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.536
OLY94649.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.536
OLY92478.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.536
OLY90856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.516
OLY94107.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.489
OLY93881.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.480
OLY91677.1
Naringenin-chalcone synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.445
OLY90854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.430
OLY92723.1
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.430
Your Current Organism:
Cnuella takakiae
NCBI taxonomy Id: 1302690
Other names: Bacteroidetes bacterium RG1-1, C. takakiae, CGMCC 1.12492, Cnuella takakiae Zhao et al. 2014, DSM 26897, strain RG1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.