STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLY90901.1Family 88 glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
OLY92787.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.973
OLY92788.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.959
OLY92796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.880
OLY92789.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.843
OLY94764.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.
     0.776
OLY94583.1
Pectinesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
OLY92790.1
exo-poly-alpha-D-galacturonosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.
     0.739
OLY92116.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.731
OLY90667.1
Neuraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.693
OLY92794.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
  
     0.666
Your Current Organism:
Cnuella takakiae
NCBI taxonomy Id: 1302690
Other names: Bacteroidetes bacterium RG1-1, C. takakiae, CGMCC 1.12492, Cnuella takakiae Zhao et al. 2014, DSM 26897, strain RG1-1
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