STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLY92100.1Nucleoside-diphosphate-sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
OLY92102.1
L-iditol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.931
OLY92104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.877
OLY92105.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.867
OLY92103.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.852
OLY92106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.841
OLY92107.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.822
OLY92108.1
Methyltransferase, TIGR04290 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.821
OLY92633.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
OLY92101.1
CDP-paratose 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.788
OLY92185.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.630
Your Current Organism:
Cnuella takakiae
NCBI taxonomy Id: 1302690
Other names: Bacteroidetes bacterium RG1-1, C. takakiae, CGMCC 1.12492, Cnuella takakiae Zhao et al. 2014, DSM 26897, strain RG1-1
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