STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLY92963.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
OLY92962.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.915
OLY92964.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.714
OLY91462.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
OLY91045.1
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.601
OLY94758.1
Cytochrome C oxidase Cbb3; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
   
 
 0.541
OLY90624.1
Sulfite dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.512
OLY91498.1
Nitrous oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.468
OLY93181.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.462
OLY92961.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.461
OLY92965.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.449
Your Current Organism:
Cnuella takakiae
NCBI taxonomy Id: 1302690
Other names: Bacteroidetes bacterium RG1-1, C. takakiae, CGMCC 1.12492, Cnuella takakiae Zhao et al. 2014, DSM 26897, strain RG1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.