STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU16055.1Sialic acid utilization regulator, RpiR family. (283 aa)    
Predicted Functional Partners:
ptbA
PTS system, maltose and glucose-specific IIA or IIB or IIC component.
 
  
 0.779
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.756
KXU15775.1
PTS system, sucrose-specific IIA or IIB or IIC component.
  
  
 0.747
KXU15682.1
PTS system, trehalose-specific IIB or IIC component.
  
  
 0.747
KXU16067.1
N-acetylneuraminate lyase.
 
   
 0.577
ccpA
Catabolite control protein A.
  
  
 0.549
KXU14293.1
PTS system, fructose-specific IIA or IIB or IIC component.
     
 0.542
fruA
PTS system, fructose-specific IIA or IIB or IIC component.
     
 0.542
penA
Cell division protein FtsI (Peptidoglycan synthetase).
       0.501
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.498
Your Current Organism:
Streptococcus oralis
NCBI taxonomy Id: 1303
Other names: ATCC 35037, CCUG 13229, CCUG 24891, CIP 102922, DSM 20627, JCM 12997, LMG 14532, LMG:14532, NCTC 11427, S. oralis, strain LVG 1, strain PB 182, strain SK23
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