Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXU14792.1 | KXU14793.1 | SORDD17_01304 | SORDD17_01305 | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | Transcriptional regulatory protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.504 |
KXU14792.1 | KXU14808.1 | SORDD17_01304 | SORDD17_01303 | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | Ferrous iron transport peroxidase EfeB. | 0.956 |
KXU14792.1 | KXU16341.1 | SORDD17_01304 | SORDD17_00454 | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | NPQTN specific sortase B. | 0.434 |
KXU14792.1 | KXU16342.1 | SORDD17_01304 | SORDD17_00455 | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | NPQTN specific sortase B. | 0.434 |
KXU14793.1 | KXU14792.1 | SORDD17_01305 | SORDD17_01304 | Transcriptional regulatory protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | 0.504 |
KXU14808.1 | KXU14792.1 | SORDD17_01303 | SORDD17_01304 | Ferrous iron transport peroxidase EfeB. | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | 0.956 |
KXU16341.1 | KXU14792.1 | SORDD17_00454 | SORDD17_01304 | NPQTN specific sortase B. | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | 0.434 |
KXU16341.1 | KXU16342.1 | SORDD17_00454 | SORDD17_00455 | NPQTN specific sortase B. | NPQTN specific sortase B. | 0.557 |
KXU16342.1 | KXU14792.1 | SORDD17_00455 | SORDD17_01304 | NPQTN specific sortase B. | Ferrous iron transport periplasmic protein EfeO; Contains peptidase-M75 domain and (frequently) cupredoxin-like domain. | 0.434 |
KXU16342.1 | KXU16341.1 | SORDD17_00455 | SORDD17_00454 | NPQTN specific sortase B. | NPQTN specific sortase B. | 0.557 |