Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXU14152.1 | KXU14153.1 | SORDD17_01506 | SORDD17_01507 | Hypothetical protein. | Putative immunity protein. | 0.529 |
KXU14152.1 | KXU14154.1 | SORDD17_01506 | SORDD17_01508 | Hypothetical protein. | Methionine ABC transporter ATP-binding protein. | 0.521 |
KXU14152.1 | KXU14155.1 | SORDD17_01506 | SORDD17_01509 | Hypothetical protein. | Hypothetical protein. | 0.520 |
KXU14153.1 | KXU14152.1 | SORDD17_01507 | SORDD17_01506 | Putative immunity protein. | Hypothetical protein. | 0.529 |
KXU14153.1 | KXU14154.1 | SORDD17_01507 | SORDD17_01508 | Putative immunity protein. | Methionine ABC transporter ATP-binding protein. | 0.785 |
KXU14153.1 | KXU14155.1 | SORDD17_01507 | SORDD17_01509 | Putative immunity protein. | Hypothetical protein. | 0.773 |
KXU14153.1 | KXU14157.1 | SORDD17_01507 | SORDD17_01511 | Putative immunity protein. | Ribosome small subunit-stimulated GTPase EngC. | 0.492 |
KXU14153.1 | KXU14160.1 | SORDD17_01507 | SORDD17_01514 | Putative immunity protein. | Thiamin pyrophosphokinase. | 0.483 |
KXU14153.1 | KXU14161.1 | SORDD17_01507 | SORDD17_01515 | Putative immunity protein. | DNA recombination protein RmuC. | 0.483 |
KXU14153.1 | rpe | SORDD17_01507 | SORDD17_01513 | Putative immunity protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.483 |
KXU14153.1 | rsgA | SORDD17_01507 | SORDD17_01512 | Putative immunity protein. | Ribosome small subunit-stimulated GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.492 |
KXU14153.1 | rsmA | SORDD17_01507 | SORDD17_01510 | Putative immunity protein. | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.492 |
KXU14153.1 | yhaM | SORDD17_01507 | SORDD17_01516 | Putative immunity protein. | 3'->5' exoribonuclease Bsu YhaM. | 0.483 |
KXU14154.1 | KXU14152.1 | SORDD17_01508 | SORDD17_01506 | Methionine ABC transporter ATP-binding protein. | Hypothetical protein. | 0.521 |
KXU14154.1 | KXU14153.1 | SORDD17_01508 | SORDD17_01507 | Methionine ABC transporter ATP-binding protein. | Putative immunity protein. | 0.785 |
KXU14154.1 | KXU14155.1 | SORDD17_01508 | SORDD17_01509 | Methionine ABC transporter ATP-binding protein. | Hypothetical protein. | 0.773 |
KXU14154.1 | KXU14157.1 | SORDD17_01508 | SORDD17_01511 | Methionine ABC transporter ATP-binding protein. | Ribosome small subunit-stimulated GTPase EngC. | 0.492 |
KXU14154.1 | KXU14160.1 | SORDD17_01508 | SORDD17_01514 | Methionine ABC transporter ATP-binding protein. | Thiamin pyrophosphokinase. | 0.492 |
KXU14154.1 | KXU14161.1 | SORDD17_01508 | SORDD17_01515 | Methionine ABC transporter ATP-binding protein. | DNA recombination protein RmuC. | 0.483 |
KXU14154.1 | rpe | SORDD17_01508 | SORDD17_01513 | Methionine ABC transporter ATP-binding protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.490 |
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