STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ48839.1PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (108 aa)    
Predicted Functional Partners:
AFZ48838.1
PFAM: Mannose-6-phosphate isomerase.
       0.797
AFZ51156.1
PFAM: PBS lyase HEAT-like repeat; HEAT repeat.
    
 
 0.643
AFZ51752.1
PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.639
AFZ48837.1
Transposase, IS605 OrfB family, central region; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
       0.636
AFZ51390.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS.
 
  
 0.628
AFZ51940.1
Cysteine desulfurase family protein; PFAM: Aminotransferase class-V.
 
  
 0.596
AFZ51579.1
PFAM: Tellurite resistance protein TerB.
  
 
 0.588
AFZ52006.1
Thioredoxin-like protein; PFAM: NifU-like domain.
  
 
 0.567
AFZ48840.1
Hypothetical protein.
       0.535
AFZ50454.1
Folate-binding protein YgfZ; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; Belongs to the GcvT family.
 
 
 0.492
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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