STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ49087.1PFAM: Protein of unknown function (DUF820). (212 aa)    
Predicted Functional Partners:
AFZ48894.1
PFAM: Protein of unknown function (DUF820).
  
     0.752
AFZ49086.1
PFAM: Protein of unknown function (DUF820); DegT/DnrJ/EryC1/StrS aminotransferase family.
 
     0.727
AFZ48879.1
PFAM: Protein of unknown function (DUF820).
  
     0.700
AFZ51242.1
PFAM: Protein of unknown function (DUF820).
  
     0.658
AFZ51243.1
PFAM: Protein of unknown function (DUF820).
  
     0.653
AFZ50236.1
PFAM: Protein of unknown function (DUF820).
  
     0.618
AFZ51468.1
PFAM: HNH endonuclease.
  
     0.613
AFZ51676.1
PFAM: Protein of unknown function (DUF820).
  
     0.609
AFZ49088.1
Hypothetical protein.
       0.605
AFZ49390.1
Hypothetical protein.
  
     0.594
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.