STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ49735.1PFAM: Tetratricopeptide repeat. (319 aa)    
Predicted Functional Partners:
AFZ50227.1
Tetratricopeptide repeat protein.
 
   0.784
AFZ50581.1
PFAM: Tetratricopeptide repeat.
 
    
0.777
AFZ49986.1
Hypothetical protein.
 
     0.774
AFZ50164.1
PFAM: Tetratricopeptide repeat.
  
     0.663
AFZ51425.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
   
 
 0.509
AFZ50155.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat.
  
 0.508
AFZ50180.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; FHA domain.
 
 
 0.464
AFZ49708.1
Molecular chaperone of HSP90 family; Molecular chaperone. Has ATPase activity.
   
 0.455
AFZ48964.1
TIGR03032 family protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase); Tetratricopeptide repeat; TIGRFAM: TIGR03032 family protein.
 
     0.427
AFZ51133.1
PFAM: Tetratricopeptide repeat.
 
    
0.417
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.