STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ49844.1PFAM: Predicted permease. (338 aa)    
Predicted Functional Partners:
AFZ50069.1
TIGR03943 family protein; PFAM: Domain of unknown function (DUF1980); TIGRFAM: TIGR03943 family protein.
 
  
 0.872
AFZ51998.1
PFAM: Multicopper oxidase.
  
  
 0.539
AFZ48986.1
Hypothetical protein.
  
     0.466
AFZ50070.1
Hypothetical protein.
 
     0.455
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.447
AFZ51038.1
PFAM: Protein of unknown function (DUF3082).
  
     0.418
AFZ50136.1
PFAM: Fatty acid desaturase.
  
     0.410
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.