STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50035.1Transcriptional regulator; PFAM: Substrate binding domain of ABC-type glycine betaine transport system; Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. (666 aa)    
Predicted Functional Partners:
AFZ50036.1
Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: domain; FAD binding domain.
 
     0.831
AFZ50038.1
HEAT repeat-containing protein; PFAM: Armadillo/beta-catenin-like repeat; PBS lyase HEAT-like repeat; HEAT repeat.
 
     0.790
AFZ50037.1
Hypothetical protein.
 
     0.734
AFZ50033.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.614
AFZ50040.1
Putative membrane protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein.
 
     0.587
AFZ49185.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
  
 0.525
AFZ51890.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
  
 0.494
AFZ50034.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.485
AFZ49429.1
Precorrin isomerase; PFAM: MerR family regulatory protein; Precorrin-8X methylmutase.
  
   
 0.475
AFZ50843.1
TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.
     
 0.475
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.