STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50332.1Putative membrane protein; PFAM: Vitamin K epoxide reductase family. (323 aa)    
Predicted Functional Partners:
AFZ51311.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide.
  
 
 
 0.786
AFZ48934.1
Putative membrane protein; PFAM: NnrU protein.
 
     0.770
AFZ51832.1
Hypothetical protein.
  
     0.755
psb27
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.754
AFZ51295.1
PFAM: Protein of unknown function (DUF3464).
  
     0.750
AFZ49406.1
Putative integral membrane protein; PFAM: YGGT family.
  
     0.742
AFZ50098.1
PFAM: Protein of unknown function (DUF1350).
  
     0.740
AFZ50686.1
Hypothetical protein.
  
     0.740
AFZ51017.1
PFAM: Protein of unknown function (DUF1092).
  
    0.738
AFZ51362.1
PFAM: Protein of unknown function (DUF3067).
  
     0.727
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.