STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50398.1Sporulation/spore germination protein; PFAM: Sporulation and spore germination. (206 aa)    
Predicted Functional Partners:
AFZ48986.1
Hypothetical protein.
  
     0.725
AFZ51403.1
PFAM: Protein of unknown function (DUF1997).
  
     0.723
AFZ50241.1
PFAM: Protein of unknown function (DUF2808).
  
     0.719
AFZ51119.1
Hypothetical protein.
  
     0.717
AFZ51552.1
Hypothetical protein.
  
     0.689
AFZ51884.1
Hypothetical protein.
  
     0.667
AFZ50397.1
PFAM: Protein of unknown function (DUF2993).
       0.663
AFZ51138.1
Hypothetical protein.
  
     0.662
AFZ51807.1
Hypothetical protein.
  
     0.655
AFZ50070.1
Hypothetical protein.
  
     0.644
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.