STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50520.1ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter. (242 aa)    
Predicted Functional Partners:
AFZ51041.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
AFZ49734.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
 
 
 0.973
AFZ50044.1
Urea ABC transporter, permease protein UrtC; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
  
 0.972
AFZ49209.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.971
AFZ51042.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
0.959
AFZ50045.1
Urea ABC transporter, permease protein UrtB; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
  
 0.849
AFZ50521.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.711
AFZ50046.1
ABC-type branched-chain amino acid transport system, periplasmic component; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; urea ABC transporter, urea binding protein.
 
  
 0.637
AFZ49849.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
     
0.633
AFZ50519.1
FtsH-interacting integral membrane protein; PFAM: Uncharacterised protein family UPF0005; Belongs to the BI1 family.
       0.539
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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