STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50611.1PFAM: Protein of unknown function (DUF497). (92 aa)    
Predicted Functional Partners:
AFZ50612.1
Hypothetical protein.
 
     0.930
AFZ49474.1
PFAM: Protein of unknown function (DUF497).
  
     0.774
AFZ50610.1
TIGRFAM: DNA sulfur modification protein DndD.
       0.773
AFZ49497.1
Hypothetical protein.
  
   0.697
AFZ48921.1
Hypothetical protein.
  
   0.682
AFZ50608.1
Uncharacterized conserved small protein; PFAM: Protein of unknown function (DUF2283).
 
     0.644
AFZ49510.1
Hypothetical protein.
  
   0.598
AFZ50609.1
Hypothetical protein.
       0.559
AFZ50607.1
Hypothetical protein.
       0.508
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.