Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50648.1Transposase; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase. (418 aa)    
Predicted Functional Partners:
AFZ50517.1
Transposase, IS605 OrfB family, central region; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain; manually curated.
  
     0.548
AFZ48930.1
Transposase, IS605 OrfB family, central region; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain.
  
     0.539
AFZ50647.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region.
       0.533
AFZ50968.1
Transposase; PFAM: Putative transposase DNA-binding domain; Probable transposase.
  
     0.520
AFZ50922.1
Transposase; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain; manually curated.
  
     0.490
AFZ49056.1
Transposase; PFAM: Putative transposase DNA-binding domain; Probable transposase.
  
     0.478
AFZ50222.1
PFAM: Transposase IS200 like; manually curated.
  
     0.441
AFZ50649.1
PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ.
       0.438
AFZ50646.1
Hypothetical protein.
       0.426
AFZ49210.1
PFAM: Putative transposase DNA-binding domain; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.415
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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