STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50713.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
AFZ50714.1
ABC-type Co2+ transport system, permease component; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.
 
   
 0.951
AFZ51289.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
 
   
 0.822
AFZ50712.1
Hypothetical protein.
     
 0.761
AFZ51288.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
   
 0.746
AFZ50996.1
Hypothetical protein.
  
     0.622
AFZ50715.1
Hypothetical protein.
       0.615
AFZ50716.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; manually curated.
 
     0.576
AFZ49332.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2062).
  
     0.524
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.490
AFZ49793.1
Hypothetical protein.
  
     0.477
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.