STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50826.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
AFZ50825.1
PFAM: Nucleotidyltransferase domain.
 
     0.946
AFZ51888.1
PFAM: Nucleotidyltransferase domain.
  
     0.774
AFZ50824.1
Hypothetical protein.
       0.639
AFZ50827.1
PFAM: Domain of unknown function DUF29.
  
    0.545
AFZ50828.1
Hypothetical protein.
       0.543
AFZ49021.1
PFAM: N-6 DNA Methylase.
  
     0.470
AFZ50829.1
TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase.
       0.449
AFZ49402.1
PFAM: Nucleotidyltransferase domain.
  
     0.417
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.