STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ50905.1PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: flavin-dependent oxidoreductase, MSMEG_0569 family. (409 aa)    
Predicted Functional Partners:
AFZ50904.1
PFAM: DsrE/DsrF-like family; TIGRFAM: MSMEG_0572 family protein.
 
     0.859
AFZ50902.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, MSMEG_0568 family.
 
     0.840
AFZ50900.1
AIR synthase-related protein, sll0787 family; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: AIR synthase-related protein, sll0787 family.
 
     0.837
AFZ50901.1
PFAM: Acetyltransferase (GNAT) family; TIGRFAM: putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
     0.832
AFZ50898.1
TIGRFAM: MSMEG_0570 family protein.
 
     0.827
AFZ50903.1
PFAM: Carbon-nitrogen hydrolase; TIGRFAM: putative nitrilase, sll0784 family.
 
    0.824
atpA
Proton translocating ATP synthase, F1 alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.495
AFZ51978.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
     
 0.479
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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