STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51251.1PFAM: Peptidase family M48. (512 aa)    
Predicted Functional Partners:
AFZ51249.1
PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein.
  
    0.788
AFZ51250.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.773
AFZ49222.1
Putative ABC-type transport system, permease component; PFAM: Exopolysaccharide synthesis, ExoD.
  
     0.577
AFZ49383.1
Hypothetical protein.
  
     0.558
AFZ51241.1
Putative S-layer protein; PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; Belongs to the OprB family.
  
     0.508
AFZ52123.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.500
AFZ50974.1
Hypothetical protein.
  
     0.469
AFZ49633.1
Hypothetical protein; Manually curated.
  
     0.461
AFZ49671.1
Hypothetical protein; PFAM: Domain of Unknown Function (DUF748); Family of unknown function (DUF490).
  
     0.436
AFZ49572.1
Hypothetical protein; Manually curated.
  
     0.435
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.