STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51361.1PFAM: HAS barrel domain. (222 aa)    
Predicted Functional Partners:
AFZ49314.1
NurA domain-containing protein; PFAM: NurA domain.
 
     0.796
AFZ50860.1
Putative ATPase; PFAM: HAS barrel domain; Domain of unknown function DUF87.
 
     0.787
AFZ49707.1
Exonuclease SbcC; PFAM: RecF/RecN/SMC N terminal domain; Rad50 zinc hook motif; TIGRFAM: exonuclease SbcC.
 
     0.776
sbcD
Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.768
AFZ51360.1
PFAM: Protein of unknown function (DUF3252).
       0.716
AFZ48853.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.715
AFZ50442.1
Organic solvent tolerance protein OstA; PFAM: Protein of unknown function (DUF3769).
  
     0.692
AFZ51838.1
Hypothetical protein.
  
     0.671
AFZ52111.1
Hypothetical protein.
  
     0.657
AFZ51745.1
Hypothetical protein.
  
     0.605
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.