STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51391.1Cadherin domain-containing protein; PFAM: Cadherin domain. (686 aa)    
Predicted Functional Partners:
AFZ50840.1
Ca2+-binding protein, RTX toxin; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Bacterial pre-peptidase C-terminal domain.
 
 
 
 0.790
AFZ51399.1
Putative protease; PFAM: Bacterial pre-peptidase C-terminal domain; Cadherin domain.
 
 
 
 0.748
AFZ50865.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
 
  
 0.743
AFZ51818.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
 
  
 0.739
AFZ49132.1
Cadherin domain-containing protein; PFAM: Cadherin domain.
 
 
 
 0.721
AFZ50796.1
VCBS repeat-containing protein; TIGRFAM: VCBS repeat.
 
 
 
 0.710
AFZ51397.1
PFAM: Bacterial pre-peptidase C-terminal domain.
 
 
 
 0.710
AFZ49841.1
Type I secretion system ABC transporter, HlyB family; PFAM: ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family.
 
  
 0.674
AFZ51180.1
Cadherin domain-containing protein; PFAM: Cadherin domain.
 
  
0.673
AFZ49127.1
Hypothetical protein.
 
 
 
 0.652
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.