STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51583.1PFAM: Chlorophyll A-B binding protein. (68 aa)    
Predicted Functional Partners:
AFZ51704.1
Hypothetical protein.
  
     0.639
AFZ51405.1
Hypothetical protein.
  
     0.614
AFZ49910.1
Hypothetical protein.
  
     0.592
AFZ50019.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1517).
  
     0.591
AFZ51124.1
PFAM: Homing endonuclease; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
     0.583
AFZ51635.1
Hypothetical protein.
  
     0.565
AFZ49105.1
PFAM: Localisation of periplasmic protein complexes; Predicted periplasmic protein (DUF2233).
  
     0.555
AFZ52090.1
PFAM: Protein of unknown function (DUF2605).
  
     0.554
AFZ50346.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein.
  
     0.552
AFZ51584.1
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
       0.548
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.