STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51609.1ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein; manually curated; non-canonical start codon. (437 aa)    
Predicted Functional Partners:
AFZ50803.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.948
AFZ51250.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.943
AFZ50380.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.920
AFZ50381.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.918
AFZ51593.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.903
AFZ50379.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
 
 0.859
AFZ51608.1
Putative MccF-like protein (microcin C7 resistance); PFAM: LD-carboxypeptidase.
       0.757
AFZ51610.1
Hypothetical protein.
       0.491
AFZ50937.1
Parallel beta-helix repeat (two copies); PFAM: Protein of unknown function (DUF1565); TIGRFAM: parallel beta-helix repeat (two copies).
  
     0.451
AFZ51921.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.